AT1G76920 protein (Arabidopsis thaliana) - STRING interaction network

AT1G76920 protein (Arabidopsis thaliana) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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	AT1G76920	F-box family protein (FBX3); F-box family protein (FBX3); FUNCTIONS IN- ubiquitin-protein ligase activity; INVOLVED IN- ubiquitin-dependent protein catabolic process; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Cyclin-like F-box (InterPro-IPR001810), Kelch repeat type 2 (InterPro-IPR011498); Has 166 Blast hits to 166 proteins in 23 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink). ; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which [...] (374 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	SKP1B	ASK2 (ARABIDOPSIS SKP1-LIKE 2); protein binding / ubiquitin-protein ligase; Similar to SKP1 in [...] (171 aa)	•	0.802
	ASK11	ASK11 (ARABIDOPSIS SKP1-LIKE 11); protein binding / ubiquitin-protein ligase; one of 20 SKP1 ho [...] (152 aa)	•	0.802
	SKP1	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1); protein binding / ubiquitin-protein ligase; SKP1 is [...] (160 aa)	•	0.802
	ASK12	ASK12 (ARABIDOPSIS SKP1-LIKE 12); protein binding / ubiquitin-protein ligase; ARABIDOPSIS SKP1- [...] (152 aa)	•	0.609
	ASK9	ASK9 (ARABIDOPSIS SKP1-LIKE 9); protein binding / ubiquitin-protein ligase; one of Arabidopsis [...] (153 aa)	•	0.609
	ASK14	ASK14 (ARABIDOPSIS SKP1-LIKE 14); protein binding / ubiquitin-protein ligase; ARABIDOPSIS SKP1- [...] (149 aa)	•	0.609
	ASK19	ASK19 (ARABIDOPSIS SKP1-LIKE 19); protein binding / ubiquitin-protein ligase; ARABIDOPSIS SKP1- [...] (200 aa)	•	0.609
	AT1G20140.1-P	ASK4 (ARABIDOPSIS SKP1-LIKE 4); protein binding / ubiquitin-protein ligase; ARABIDOPSIS SKP1-LI [...] (163 aa)	•	0.609
	ASK1	SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4); kinase; Encodes a plant protein kinase similar to th [...] (363 aa)	•	0.609
	TTL3	TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3); binding / protein binding; Encodes a member [...] (691 aa)	•	0.563

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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