rpsG protein (Synechocystis sp. 6803) - STRING interaction network

rpsG protein (Synechocystis sp. 6803) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	rpsG	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (By similarity) (156 aa)
		(Synechocystis sp. 6803)
Predicted Functional Partners:
	rpsL	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy (By [...] (126 aa)	•		•	•	•	•	0.998
	tuf	elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the [...] (399 aa)	•	•	•	•		•	0.997
	rpsD	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rR [...] (202 aa)	•	•	•	•	•		0.996
	rpsE	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy (By [...] (173 aa)	•	•	•	•	•		0.996
	rpsS	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S [...] (92 aa)	•		•	•	•		0.995
	rpsJ	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (By similarity) (105 aa)	•		•	•	•		0.990
	rpsC	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S r [...] (240 aa)	•	•	•	•			0.989
	rpsH	30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rR [...] (133 aa)	•		•	•			0.989
	rpsM	30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts sever [...] (127 aa)	•		•	•			0.987
	rpsQ	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to t [...] (81 aa)	•		•	•			0.984

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: high (93%)

Permalink