version_number_image
  Vta1 protein (Mus musculus) - STRING interaction network
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
Vta1
Vps20-associated 1 homolog (S. cerevisiae) Gene; Involved in the endosomal multivesicular bodies (MVB) pathway. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. Thought to be a cofactor of VPS4A/B, which catalyzes disassembles membrane-associated ESCRT-III assemblies (By similarity). Involved in the sorting and down-regulation of EGFR (309 aa)
(Mus musculus)
Predicted Functional Partners:
Vps4a
vacuolar protein sorting 4a (yeast) Gene; Involved in late steps of the endosomal multivesicula [...] (437 aa)
      0.833
Vps4b
vacuolar protein sorting 4b (yeast) Gene; Involved in late steps of the endosomal multivesicula [...] (444 aa)
      0.828
Chmp1b
RIKEN cDNA 2610002M06 gene Gene; Probable peripherally associated component of the endosomal so [...] (199 aa)
       0.800
Chmp1a
chromatin modifying protein 1A Gene; Probable peripherally associated component of the endosoma [...] (196 aa)
       0.800
Chmp5
chromatin modifying protein 5 Gene; Probable peripherally associated component of the endosomal [...] (219 aa)
       0.775
Lyst
lysosomal trafficking regulator Gene; May be required for sorting endosomal resident proteins i [...] (3787 aa)
      0.600
Ngfr
nerve growth factor receptor (TNFR superfamily, member 16) Gene; Low affinity receptor which ca [...] (427 aa)
       0.537
Mitd1
MIT, microtubule interacting and transport, domain containing 1 Gene; May play a role in endoso [...] (249 aa)
       0.409
Chmp2a
chromatin modifying protein 2A Gene; Probable core component of the endosomal sorting required [...] (222 aa)
       0.407
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: medium (53%)
Permalink